Detailed information of matrix profile MA1724.1

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Profile summary
Name: Rfx6
Matrix ID: MA1724.1
Class: Fork
Family: RFX-related
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 33033118
Uniprot ID: Q8C7R7  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 2015 1960 187 1093 344 7215 179 378 8085 7740 552 2745 2268 ]
C [ 2043 2070 7859 6405 1066 64 102 7474 117 258 6811 2902 1905 ]
G [ 1249 2015 232 242 146 1205 8215 359 132 339 552 1397 2945 ]
T [ 3243 2505 272 810 6994 66 54 339 216 213 635 1506 1432 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1724.1 MA1724 1 Rfx6 Mus musculus
RFX-related Fork
MA1724.2 MA1724 2 Rfx6 Mus musculus
RFX-related Fork
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0917.1

ChIP-seq Centrality
-log(P-value): 964.432

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0917.1

ChIP-seq Centrality
-log(P-value): 965.821

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: