Detailed information of matrix profile MA1673.1

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Profile summary
Name: LBD18
Matrix ID: MA1673.1
Class: Other
Family: LBD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 29681137
Uniprot ID: O22131  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 1910 1735 679 668 240 251 166 153 130 286 1449 2177 ]
C [ 1247 671 384 1009 159 5338 5531 316 290 4833 833 922 ]
G [ 1189 1201 472 191 93 171 40 5168 5323 245 2201 1402 ]
T [ 1519 2258 4330 3997 5373 105 128 228 122 501 1382 1364 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1673.1 MA1673 1 LBD18 Arabidopsis thaliana
LBD Other
MA1673.2 MA1673 2 LBD18 Arabidopsis thaliana
LBD Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0675.1

ChIP-seq Centrality
-log(P-value): 2359.21

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0675.1

ChIP-seq Centrality
-log(P-value): 2523.21

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: