Detailed information of matrix profile MA1673.1

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Profile summary
Name: LBD18
Matrix ID: MA1673.1
Class: Other
Family: LBD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 29681137
Uniprot ID: O22131  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 1364 1382 501 122 228 128 105 5373 3997 4330 2258 1519 ]
C [ 1402 2201 245 5323 5168 40 171 93 191 472 1201 1189 ]
G [ 922 833 4833 290 316 5531 5338 159 1009 384 671 1247 ]
T [ 2177 1449 286 130 153 166 251 240 668 679 1735 1910 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1673.1 MA1673 1 LBD18 Arabidopsis thaliana
LBD Other
MA1673.2 MA1673 2 LBD18 Arabidopsis thaliana
LBD Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0675.1

ChIP-seq Centrality
-log(P-value): 2359.21

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0675.1

ChIP-seq Centrality
-log(P-value): 2523.21

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: