Detailed information of matrix profile MA1664.1

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Profile summary
Name: HSFA6B
Matrix ID: MA1664.1
Class: Heat
Family: HSF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 27493213
Uniprot ID: Q9LUH8  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 98 87 19 0 8 438 0 554 483 119 82 69 10 3 43 ]
C [ 242 59 6 595 136 46 24 16 13 131 291 16 8 595 168 ]
G [ 121 34 13 5 45 101 572 8 34 191 154 6 2 1 61 ]
T [ 139 420 562 0 411 15 4 22 70 159 73 509 580 1 328 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1664.1 MA1664 1 HSFA6B Arabidopsis thaliana
HSF Heat
MA1664.2 MA1664 2 HSFA6B Arabidopsis thaliana
HSF Heat
MA1664.3 MA1664 3 HSFA6B Arabidopsis thaliana
HSF Heat
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0671.1

ChIP-seq Centrality
-log(P-value): 2540.12

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0671.1

ChIP-seq Centrality
-log(P-value): 2523.12

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: