Detailed information of matrix profile MA1662.1

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Profile summary
Name: AT3G10030
Matrix ID: MA1662.1
Class: Tryptophan
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 31133749
Uniprot ID: Q94JR1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 335 296 66 30 965 972 22 765 16 873 378 300 274 ]
C [ 254 117 60 12 12 11 958 20 8 53 182 188 212 ]
G [ 122 316 55 4 22 16 8 199 962 9 234 225 124 ]
T [ 299 281 829 964 11 11 22 26 24 75 216 297 400 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1662.1 MA1662 1 AT3G10030 Arabidopsis thaliana
Trihelix Tryptophan
MA1662.2 MA1662 2 AT3G10030 Arabidopsis thaliana
Trihelix Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0651.1

ChIP-seq Centrality
-log(P-value): 956.459

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0651.1

ChIP-seq Centrality
-log(P-value): 1031.62

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: