Detailed information of matrix profile MA1659.1

  1. Home
  2. Matrix > MA1659.1

Profile summary
Name: ABF4
Matrix ID: MA1659.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25220462
Uniprot ID: Q9M7Q2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 1666 1793 1781 253 5815 200 161 73 62 155 1762 2164 ]
C [ 849 928 1360 1825 52 5470 44 47 86 62 2625 1105 ]
G [ 1901 1865 583 3358 58 166 5666 20 5763 5169 689 1325 ]
T [ 1630 1460 2322 610 121 210 175 5906 135 660 970 1452 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1659.1 MA1659 1 ABF4 Arabidopsis thaliana
Group Basic
MA1659.2 MA1659 2 ABF4 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0647.1

ChIP-seq Centrality
-log(P-value): 4241.86

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0647.1

ChIP-seq Centrality
-log(P-value): 4214.43

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: