Detailed information of matrix profile MA1659.1

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Profile summary
Name: ABF4
Matrix ID: MA1659.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25220462
Uniprot ID: Q9M7Q2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 1452 970 660 135 5906 175 210 121 610 2322 1460 1630 ]
C [ 1325 689 5169 5763 20 5666 166 58 3358 583 1865 1901 ]
G [ 1105 2625 62 86 47 44 5470 52 1825 1360 928 849 ]
T [ 2164 1762 155 62 73 161 200 5815 253 1781 1793 1666 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1659.1 MA1659 1 ABF4 Arabidopsis thaliana
Group Basic
MA1659.2 MA1659 2 ABF4 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0647.1

ChIP-seq Centrality
-log(P-value): 4241.86

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0647.1

ChIP-seq Centrality
-log(P-value): 4214.43

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: