Detailed information of matrix profile MA1608.1

  1. Home
  2. Matrix > MA1608.1

Profile summary
Name: Isl1
Matrix ID: MA1608.1
Class: Homeo
Family: HD-LIM
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 18585359
Uniprot ID: P61372  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 1832 1076 356 432 5476 67 64 5462 1089 1089 1488 ]
C [ 1057 1295 4710 4885 30 54 104 45 410 1745 1472 ]
G [ 1408 1473 192 54 99 34 39 20 3702 1318 1392 ]
T [ 1340 1793 379 266 32 5482 5430 110 436 1485 1285 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1608.1 MA1608 1 Isl1 Mus musculus
HD-LIM Homeo
MA1608.2 MA1608 2 Isl1 Mus musculus
HD-LIM Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0512.1

ChIP-seq Centrality
-log(P-value): 20314.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0512.1

ChIP-seq Centrality
-log(P-value): 20466.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: