Detailed information of matrix profile MA1603.1

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Profile summary
Name: Dmrt1
Matrix ID: MA1603.1
Class: DM-type
Family: DMRT
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 26005864
Uniprot ID: Q9QZ59  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 2409 6921 4174 17387 351 5335 1789 592 312 211 12234 5354 2260 ]
C [ 1389 4132 2521 200 17032 322 456 104 139 82 918 1246 12329 ]
G [ 11809 1333 1233 161 185 205 482 110 17633 69 1228 4222 1113 ]
T [ 2688 5909 10367 547 727 12433 15568 17489 211 17933 3915 7473 2593 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1603.1 MA1603 1 Dmrt1 Mus musculus
DMRT DM-type
MA1603.2 MA1603 2 Dmrt1 Mus musculus
DMRT DM-type
     

-log(P-value) = 10415.2

TFFM details

TFFM ID: TFFM0464.1

ChIP-seq Centrality
-log(P-value): 20086.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0464.1

ChIP-seq Centrality
-log(P-value): 20401.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: