Detailed information of matrix profile MA1603.1

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Profile summary
Name: Dmrt1
Matrix ID: MA1603.1
Class: DM-type
Family: DMRT
Collection: CORE
Taxon: Vertebrates
Species: Mus musculus
Data Type: ChIP-seq
Validation: 26005864
Uniprot ID: Q9QZ59  
Source: 30462313
Comment:

Sequence logo

Frequency matrix

         
A [ 2593 7473 3915 17933 211 17489 15568 12433 727 547 10367 5909 2688 ]
C [ 1113 4222 1228 69 17633 110 482 205 185 161 1233 1333 11809 ]
G [ 12329 1246 918 82 139 104 456 322 17032 200 2521 4132 1389 ]
T [ 2260 5354 12234 211 312 592 1789 5335 351 17387 4174 6921 2409 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1603.1 MA1603 1 Dmrt1 Mus musculus
DMRT DM-type
MA1603.2 MA1603 2 Dmrt1 Mus musculus
DMRT DM-type
     

-log(P-value) = 10415.2

TFFM details

TFFM ID: TFFM0464.1

ChIP-seq Centrality
-log(P-value): 20086.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0464.1

ChIP-seq Centrality
-log(P-value): 20401.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: