Detailed information of matrix profile MA1564.2

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Profile summary
Name: SP9
Matrix ID: MA1564.2
Class: C2H2
Family: Three-zinc
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 26187067
Uniprot ID: P0CG40  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 566 321 2451 2 211 22 0 39 1192 188 ]
C [ 2451 2451 1127 2451 200 2451 2451 2451 1259 1863 ]
G [ 309 113 56 17 2451 0 0 24 38 191 ]
T [ 518 284 96 9 173 14 30 412 353 588 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1564.1 MA1564 1 SP9 Homo sapiens
Three-zinc C2H2
MA1564.2 MA1564 2 SP9 Homo sapiens
Three-zinc C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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GC Content: