Detailed information of matrix profile MA1552.1

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Profile summary
Name: RARB
Matrix ID: MA1552.1
Class: Nuclear
Family: Thyroid
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 1738600
Uniprot ID: P10826  
Source: 28473536
Comment: TF

Sequence logo

Frequency matrix

         
A [ 226 371 16 7 13 4 472 3 16 472 76 31 0 56 ]
C [ 55 45 8 0 18 472 0 150 7 52 472 472 111 169 ]
G [ 128 101 472 472 26 8 5 0 472 64 4 17 45 30 ]
T [ 63 10 12 76 472 16 3 322 5 21 10 3 361 217 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1552.1 MA1552 1 RARB Homo sapiens
Thyroid Nuclear
MA1552.2 MA1552 2 RARB Homo sapiens
Thyroid Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0876.1

ChIP-seq Centrality
-log(P-value): 428.11

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0876.1

ChIP-seq Centrality
-log(P-value): 446.426

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: