Detailed information of matrix profile MA1540.1

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Profile summary
Name: NR5A1
Matrix ID: MA1540.1
Class: Nuclear
Family: FTZF1related(NR5A)
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 10913126
Uniprot ID: Q13285  
Source: 28473536
Comment:

Sequence logo

Frequency matrix

         
A [ 767 906 84 4118 4118 0 0 951 70 4118 849 ]
C [ 991 1690 4118 0 128 0 0 2021 4118 242 1323 ]
G [ 1268 902 716 287 137 4118 4118 381 218 1684 820 ]
T [ 1093 2428 135 4 143 86 0 4118 651 287 1126 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1540.1 MA1540 1 NR5A1 Homo sapiens
FTZF1related(NR5A) Nuclear
MA1540.2 MA1540 2 NR5A1 Mus musculus
FTZF1related(NR5A) Nuclear
MA1540.3 MA1540 3 NR5A1 Mus musculus
FTZF1related(NR5A) Nuclear
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0543.1

ChIP-seq Centrality
-log(P-value): 1283.49

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0543.1

ChIP-seq Centrality
-log(P-value): 1297.98

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: