Detailed information of matrix profile MA1446.1

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Profile summary
Name: daf-16
Matrix ID: MA1446.1
Class: Fork
Family: FOX
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 25215497
Uniprot ID: O16850  
Source: 30445619
Comment:

Sequence logo

Frequency matrix

         
A [ 466 389 135 77 1437 1421 1534 26 1526 323 557 466 ]
C [ 329 341 20 79 95 86 6 1481 6 925 319 349 ]
G [ 350 350 1393 38 23 12 5 2 16 148 365 329 ]
T [ 417 482 14 1368 7 43 17 53 14 166 321 418 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1446.1 MA1446 1 daf-16 Caenorhabditis elegans
FOX Fork
MA1446.2 MA1446 2 daf-16 Caenorhabditis elegans
FOX Fork
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0462.1

ChIP-seq Centrality
-log(P-value): 830.41

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0462.1

ChIP-seq Centrality
-log(P-value): 721.95

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: