Detailed information of matrix profile MA1445.1

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Profile summary
Name: ceh-28
Matrix ID: MA1445.1
Class: Homeo
Family: NK
Collection: CORE
Taxon: Nematodes
Species: Caenorhabditis elegans
Data Type: ChIP-seq
Validation: 25215497
Uniprot ID: G5EE18  
Source: 30445619
Comment:

Sequence logo

Frequency matrix

         
A [ 2430 2544 4955 0 17 0 4956 0 1970 1771 ]
C [ 480 210 1 3 4941 0 0 2 237 275 ]
G [ 278 237 2 0 0 4944 2 1 207 482 ]
T [ 1770 1967 0 4955 0 14 0 4955 2544 2430 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1445.1 MA1445 1 ceh-28 Caenorhabditis elegans
NK Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0456.1

ChIP-seq Centrality
-log(P-value): 1287.45

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0456.1

ChIP-seq Centrality
-log(P-value): 1282.21

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: