Detailed information of matrix profile MA1420.1

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Profile summary
Name: IRF5
Matrix ID: MA1420.1
Class: Tryptophan
Family: Interferon-regulatory
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25896227
Uniprot ID: Q13568  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 157 22 15 40 1 8 37 4 1 44 7 21 38 42 ]
C [ 23 25 12 25 7 365 0 0 5 4 6 357 17 22 ]
G [ 80 171 84 6 11 30 182 180 0 5 2 3 177 169 ]
T [ 22 29 223 206 224 105 0 1 225 224 223 15 10 35 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1420.1 MA1420 1 IRF5 Homo sapiens
Interferon-regulatory Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0852.1

ChIP-seq Centrality
-log(P-value): 927.673

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0852.1

ChIP-seq Centrality
-log(P-value): 377.065

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: