Detailed information of matrix profile MA1420.1

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Profile summary
Name: IRF5
Matrix ID: MA1420.1
Class: Tryptophan
Family: Interferon-regulatory
Collection: CORE
Taxon: Vertebrates
Species: Homo sapiens
Data Type: HT-SELEX
Validation: 25896227
Uniprot ID: Q13568  
Source: 23332764
Comment:

Sequence logo

Frequency matrix

         
A [ 35 10 15 223 224 225 1 0 105 224 206 223 29 22 ]
C [ 169 177 3 2 5 0 180 182 30 11 6 84 171 80 ]
G [ 22 17 357 6 4 5 0 0 365 7 25 12 25 23 ]
T [ 42 38 21 7 44 1 4 37 8 1 40 15 22 157 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1420.1 MA1420 1 IRF5 Homo sapiens
Interferon-regulatory Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0852.1

ChIP-seq Centrality
-log(P-value): 927.673

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0852.1

ChIP-seq Centrality
-log(P-value): 377.065

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: