Detailed information of matrix profile MA1402.1

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Profile summary
Name: BPC6
Matrix ID: MA1402.1
Class: BBR/BPC
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 15722463
Uniprot ID: Q8L999  
Source: 27203113
Comment: No

Sequence logo

Frequency matrix

         
A [ 24 18 13 15 12 6 0 2 1 0 1 2 2 0 12 4 12 8 6 3 50 ]
C [ 134 19 161 7 142 2 160 6 177 1 168 0 186 1 169 3 168 6 170 2 123 ]
G [ 2 0 10 5 7 5 3 1 2 0 0 0 0 0 0 0 5 0 0 2 1 ]
T [ 28 151 4 161 27 175 25 179 8 187 19 186 0 187 7 181 3 174 12 181 14 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1402.1 MA1402 1 BPC6 Arabidopsis thaliana
BBR/BPC
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: