Detailed information of matrix profile MA1397.1

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Profile summary
Name: AT1G74840
Matrix ID: MA1397.1
Class: Tryptophan
Family: MYB-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 92 137 13 11 600 0 0 0 460 199 278 ]
C [ 228 235 38 5 0 0 600 561 2 114 14 ]
G [ 72 60 0 6 0 0 0 0 92 32 8 ]
T [ 208 168 549 578 0 600 0 39 46 255 300 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1397.1 MA1397 1 AT1G74840 Arabidopsis thaliana
MYB-related Tryptophan
MA1397.2 MA1397 2 AT1G74840 Arabidopsis thaliana
MYB-related Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0245.1

ChIP-seq Centrality
-log(P-value): 18195.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0245.1

ChIP-seq Centrality
-log(P-value): 18417.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: