Detailed information of matrix profile MA1397.1

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Profile summary
Name: AT1G74840
Matrix ID: MA1397.1
Class: Tryptophan
Family: MYB-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 300 255 46 39 0 600 0 578 549 168 208 ]
C [ 8 32 92 0 0 0 0 6 0 60 72 ]
G [ 14 114 2 561 600 0 0 5 38 235 228 ]
T [ 278 199 460 0 0 0 600 11 13 137 92 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1397.1 MA1397 1 AT1G74840 Arabidopsis thaliana
MYB-related Tryptophan
MA1397.2 MA1397 2 AT1G74840 Arabidopsis thaliana
MYB-related Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0245.1

ChIP-seq Centrality
-log(P-value): 18195.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0245.1

ChIP-seq Centrality
-log(P-value): 18417.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: