Detailed information of matrix profile MA1385.1

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Profile summary
Name: AT2G40260
Matrix ID: MA1385.1
Class: Tryptophan
Family: GARP_G2-like
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 139 162 250 250 383 461 148 599 0 1 0 0 134 76 130 ]
C [ 129 121 72 66 35 0 151 0 0 0 600 194 152 83 87 ]
G [ 27 54 67 114 8 2 35 0 0 0 0 9 29 20 78 ]
T [ 305 263 211 170 174 137 266 1 600 599 0 397 285 421 305 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1385.1 MA1385 1 AT2G40260 Arabidopsis thaliana
GARP_G2-like Tryptophan
MA1385.2 MA1385 2 AT2G40260 Arabidopsis thaliana
GARP_G2-like Tryptophan
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0254.1

ChIP-seq Centrality
-log(P-value): 6180.34

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0254.1

ChIP-seq Centrality
-log(P-value): 6159.67

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: