Detailed information of matrix profile MA1376.1

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Profile summary
Name: DEAR3
Matrix ID: MA1376.1
Class: AP2/EREBP
Family: ERF/DREB
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24477691
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 192 231 223 18 0 14 0 0 0 1 2 179 156 135 157 155 191 ]
C [ 143 61 7 6 0 1 597 0 0 71 1 100 180 84 112 160 76 ]
G [ 90 140 112 131 597 14 0 597 596 0 592 277 78 209 179 128 187 ]
T [ 172 165 255 442 0 568 0 0 1 525 2 41 183 169 149 154 143 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1376.1 MA1376 1 DEAR3 Arabidopsis thaliana
ERF/DREB AP2/EREBP
MA1376.2 MA1376 2 DEAR3 Arabidopsis thaliana
ERF/DREB AP2/EREBP
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0321.1

ChIP-seq Centrality
-log(P-value): 8741.49

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0321.1

ChIP-seq Centrality
-log(P-value): 8660.22

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: