Detailed information of matrix profile MA1371.2

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Profile summary
Name: IDD4
Matrix ID: MA1371.2
Class: C2H2
Family: IDD
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 24039602
Uniprot ID: Q8GYC1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 429 57 430 510 470 529 186 16 580 0 585 581 547 448 309 ]
C [ 5 250 0 0 29 42 301 0 10 591 0 3 15 24 71 ]
G [ 140 242 14 0 78 16 78 575 0 0 6 7 23 35 61 ]
T [ 17 42 147 81 14 4 26 0 1 0 0 0 6 84 150 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1371.1 MA1371 1 IDD4 Arabidopsis thaliana
IDD C2H2
MA1371.2 MA1371 2 IDD4 Arabidopsis thaliana
IDD C2H2
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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GC Content: