Detailed information of matrix profile MA1367.1

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Profile summary
Name: AT1G76870
Matrix ID: MA1367.1
Class: Tryptophan
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22236699
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 146 155 43 20 4 0 2 36 10 145 123 91 115 100 ]
C [ 35 53 222 257 0 0 0 2 5 3 73 65 59 53 ]
G [ 46 71 150 4 452 450 6 0 5 21 173 127 64 94 ]
T [ 229 177 41 175 0 6 448 418 436 287 87 173 218 209 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1367.1 MA1367 1 AT1G76870 Arabidopsis thaliana
Trihelix Tryptophan
MA1367.2 MA1367 2 AT1G76870 Arabidopsis thaliana
Trihelix Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: