Detailed information of matrix profile MA1367.1

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Profile summary
Name: AT1G76870
Matrix ID: MA1367.1
Class: Tryptophan
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 22236699
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 209 218 173 87 287 436 418 448 6 0 175 41 177 229 ]
C [ 94 64 127 173 21 5 0 6 450 452 4 150 71 46 ]
G [ 53 59 65 73 3 5 2 0 0 0 257 222 53 35 ]
T [ 100 115 91 123 145 10 36 2 0 4 20 43 155 146 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1367.1 MA1367 1 AT1G76870 Arabidopsis thaliana
Trihelix Tryptophan
MA1367.2 MA1367 2 AT1G76870 Arabidopsis thaliana
Trihelix Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: