Detailed information of matrix profile MA1365.1

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Profile summary
Name: AT5G47660
Matrix ID: MA1365.1
Class: Tryptophan
Family: Trihelix
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 25215497
Uniprot ID: Q9FGJ1  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 74 76 64 65 68 20 44 6 0 71 244 0 12 23 12 ]
C [ 18 30 73 63 21 8 1 15 0 8 0 244 142 24 83 ]
G [ 13 33 14 25 46 25 0 10 0 0 0 0 10 169 6 ]
T [ 139 105 93 91 109 191 199 213 244 165 0 0 80 28 143 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1365.1 MA1365 1 AT5G47660 Arabidopsis thaliana
Trihelix Tryptophan
MA1365.2 MA1365 2 AT5G47660 Arabidopsis thaliana
Trihelix Tryptophan
MA1365.3 MA1365 3 AT5G47660 Arabidopsis thaliana
Trihelix Tryptophan
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: