Detailed information of matrix profile MA1338.1

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Profile summary
Name: DPBF3
Matrix ID: MA1338.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10636868
Uniprot ID: Q9LES3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 246 225 200 77 142 259 1 598 0 0 0 0 0 14 460 ]
C [ 43 52 40 35 74 93 349 0 598 0 0 0 0 584 37 ]
G [ 149 142 98 351 358 0 236 0 0 598 0 598 422 0 76 ]
T [ 160 179 260 135 24 246 12 0 0 0 598 0 176 0 25 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1338.1 MA1338 1 DPBF3 Arabidopsis thaliana
Group Basic
MA1338.2 MA1338 2 DPBF3 Arabidopsis thaliana
Group Basic
MA1338.3 MA1338 3 DPBF3 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0226.1

ChIP-seq Centrality
-log(P-value): 14313.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0226.1

ChIP-seq Centrality
-log(P-value): 14325.1

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: