Detailed information of matrix profile MA1336.1

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Profile summary
Name: TGA3
Matrix ID: MA1336.1
Class: Basic
Family: Group
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 8487298
Uniprot ID: Q39234  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 182 290 3 0 598 0 26 0 71 593 0 39 306 156 ]
C [ 69 61 3 6 0 577 1 1 527 0 83 447 52 67 ]
G [ 189 232 0 583 0 0 571 0 0 1 215 51 104 87 ]
T [ 158 15 592 9 0 21 0 597 0 4 300 61 136 288 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1336.1 MA1336 1 TGA3 Arabidopsis thaliana
Group Basic
MA1336.2 MA1336 2 TGA3 Arabidopsis thaliana
Group Basic
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0403.1

ChIP-seq Centrality
-log(P-value): 9717.31

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0403.1

ChIP-seq Centrality
-log(P-value): 9706.31

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: