Detailed information of matrix profile MA1329.2

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Profile summary
Name: ZHD1
Matrix ID: MA1329.2
Class: Homeo
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: Q9SB61  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 988 1035 106 51 2398 2409 22 20 2392 738 220 750 978 ]
C [ 370 473 60 25 12 9 18 26 9 193 193 333 309 ]
G [ 423 402 73 14 43 29 15 14 24 1155 246 422 351 ]
T [ 691 562 2233 2382 19 25 2417 2412 47 386 1813 967 834 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1329.1 MA1329 1 ZHD1 Arabidopsis thaliana
PLINC Homeo
MA1329.2 MA1329 2 ZHD1 Arabidopsis thaliana
PLINC Homeo
MA1329.3 MA1329 3 ZHD1 Arabidopsis thaliana
PLINC Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0290.2

ChIP-seq Centrality
-log(P-value): 626.638

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0290.2

ChIP-seq Centrality
-log(P-value): 600.641

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: