Detailed information of matrix profile MA1329.2

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Profile summary
Name: ZHD1
Matrix ID: MA1329.2
Class: Homeo
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: Q9SB61  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 834 967 1813 386 47 2412 2417 25 19 2382 2233 562 691 ]
C [ 351 422 246 1155 24 14 15 29 43 14 73 402 423 ]
G [ 309 333 193 193 9 26 18 9 12 25 60 473 370 ]
T [ 978 750 220 738 2392 20 22 2409 2398 51 106 1035 988 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1329.1 MA1329 1 ZHD1 Arabidopsis thaliana
PLINC Homeo
MA1329.2 MA1329 2 ZHD1 Arabidopsis thaliana
PLINC Homeo
MA1329.3 MA1329 3 ZHD1 Arabidopsis thaliana
PLINC Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0290.2

ChIP-seq Centrality
-log(P-value): 626.638

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0290.2

ChIP-seq Centrality
-log(P-value): 600.641

TFFM detailed summary logos

Description:

Alias:

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Consensus:

Included Models:

GC Content: