Detailed information of matrix profile MA1329.1

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Profile summary
Name: ZHD1
Matrix ID: MA1329.1
Class: Homeo
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 301 313 219 122 182 2 406 591 0 0 600 324 33 131 300 ]
C [ 57 53 58 211 44 9 28 3 0 0 0 8 132 73 43 ]
G [ 64 77 136 145 168 8 166 6 0 0 0 259 115 183 109 ]
T [ 178 157 187 122 206 581 0 0 600 600 0 9 320 213 148 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1329.1 MA1329 1 ZHD1 Arabidopsis thaliana
PLINC Homeo
MA1329.2 MA1329 2 ZHD1 Arabidopsis thaliana
PLINC Homeo
MA1329.3 MA1329 3 ZHD1 Arabidopsis thaliana
PLINC Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0290.1

ChIP-seq Centrality
-log(P-value): 19424.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0290.1

ChIP-seq Centrality
-log(P-value): 19400.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: