Detailed information of matrix profile MA1329.1

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Profile summary
Name: ZHD1
Matrix ID: MA1329.1
Class: Homeo
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID:
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 148 213 320 9 0 600 600 0 0 581 206 122 187 157 178 ]
C [ 109 183 115 259 0 0 0 6 166 8 168 145 136 77 64 ]
G [ 43 73 132 8 0 0 0 3 28 9 44 211 58 53 57 ]
T [ 300 131 33 324 600 0 0 591 406 2 182 122 219 313 301 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1329.1 MA1329 1 ZHD1 Arabidopsis thaliana
PLINC Homeo
MA1329.2 MA1329 2 ZHD1 Arabidopsis thaliana
PLINC Homeo
MA1329.3 MA1329 3 ZHD1 Arabidopsis thaliana
PLINC Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0290.1

ChIP-seq Centrality
-log(P-value): 19424.4

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0290.1

ChIP-seq Centrality
-log(P-value): 19400.0

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: