Detailed information of matrix profile MA1326.1

  1. Home
  2. Matrix > MA1326.1

Profile summary
Name: ZHD5
Matrix ID: MA1326.1
Class: Homeo
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: Q9FRL5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 241 9 1 600 600 0 0 576 45 162 132 ]
C [ 138 237 0 0 0 6 194 2 371 105 140 ]
G [ 170 19 0 0 0 3 90 22 19 217 122 ]
T [ 51 335 599 0 0 591 316 0 165 116 206 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1326.1 MA1326 1 ZHD5 Arabidopsis thaliana
PLINC Homeo
MA1326.2 MA1326 2 ZHD5 Arabidopsis thaliana
PLINC Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0291.1

ChIP-seq Centrality
-log(P-value): 18160.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0291.1

ChIP-seq Centrality
-log(P-value): 17836.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: