Detailed information of matrix profile MA1326.1

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Profile summary
Name: ZHD5
Matrix ID: MA1326.1
Class: Homeo
Family: PLINC
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11247607
Uniprot ID: Q9FRL5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 206 116 165 0 316 591 0 0 599 335 51 ]
C [ 122 217 19 22 90 3 0 0 0 19 170 ]
G [ 140 105 371 2 194 6 0 0 0 237 138 ]
T [ 132 162 45 576 0 0 600 600 1 9 241 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1326.1 MA1326 1 ZHD5 Arabidopsis thaliana
PLINC Homeo
MA1326.2 MA1326 2 ZHD5 Arabidopsis thaliana
PLINC Homeo
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0291.1

ChIP-seq Centrality
-log(P-value): 18160.9

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0291.1

ChIP-seq Centrality
-log(P-value): 17836.6

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: