Detailed information of matrix profile MA1323.1

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Profile summary
Name: GATA19
Matrix ID: MA1323.1
Class: Other
Family: C4-GATA-related
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 12504119
Uniprot ID: Q6QPM2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 22 56 10 202 0 2 1 21 159 33 6 ]
C [ 101 54 2 0 0 197 55 1 7 1 81 ]
G [ 27 51 190 0 0 3 89 180 27 6 13 ]
T [ 52 41 0 0 202 0 57 0 9 162 102 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1323.1 MA1323 1 GATA19 Arabidopsis thaliana
C4-GATA-related Other
MA1323.2 MA1323 2 GATA19 Arabidopsis thaliana
C4-GATA-related Other
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0344.1

ChIP-seq Centrality
-log(P-value): 168.37

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0344.1

ChIP-seq Centrality
-log(P-value): 178.533

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: