Detailed information of matrix profile MA1317.1

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Profile summary
Name: WRKY50
Matrix ID: MA1317.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q8VWQ5  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 104 57 6 3 0 567 0 2 43 29 51 116 142 ]
C [ 213 56 1 0 0 0 568 22 10 23 63 88 124 ]
G [ 88 216 2 0 568 1 0 1 4 14 48 90 87 ]
T [ 163 239 559 565 0 0 0 543 511 502 406 274 215 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1317.1 MA1317 1 WRKY50 Arabidopsis thaliana
WRKY GCM
MA1317.2 MA1317 2 WRKY50 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0425.1

ChIP-seq Centrality
-log(P-value): 31467.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0425.1

ChIP-seq Centrality
-log(P-value): 27501.7

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: