Detailed information of matrix profile MA1315.1

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Profile summary
Name: WRKY24
Matrix ID: MA1315.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9FFS3  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 112 42 21 0 2 0 599 1 0 133 101 111 123 143 ]
C [ 130 423 2 0 0 0 0 599 114 29 36 79 102 116 ]
G [ 158 50 525 0 0 600 1 0 0 27 36 78 103 101 ]
T [ 200 85 52 600 598 0 0 0 486 411 427 332 272 240 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1315.1 MA1315 1 WRKY24 Arabidopsis thaliana
WRKY GCM
MA1315.2 MA1315 2 WRKY24 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0417.1

ChIP-seq Centrality
-log(P-value): 20057.8

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0417.1

ChIP-seq Centrality
-log(P-value): 20124.4

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: