Detailed information of matrix profile MA1308.1

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Profile summary
Name: WRKY70
Matrix ID: MA1308.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9LY00  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 309 435 493 536 0 0 0 599 599 1 28 130 144 ]
C [ 118 37 11 3 0 0 599 0 0 584 32 181 168 ]
G [ 73 45 24 58 599 0 0 0 0 0 464 165 77 ]
T [ 99 82 71 2 0 599 0 0 0 14 75 123 210 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1308.1 MA1308 1 WRKY70 Arabidopsis thaliana
WRKY GCM
MA1308.2 MA1308 2 WRKY70 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0429.1

ChIP-seq Centrality
-log(P-value): 21819.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0429.1

ChIP-seq Centrality
-log(P-value): 21739.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: