Detailed information of matrix profile MA1308.1

  1. Home
  2. Matrix > MA1308.1

Profile summary
Name: WRKY70
Matrix ID: MA1308.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9LY00  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 210 123 75 14 0 0 0 599 0 2 71 82 99 ]
C [ 77 165 464 0 0 0 0 0 599 58 24 45 73 ]
G [ 168 181 32 584 0 0 599 0 0 3 11 37 118 ]
T [ 144 130 28 1 599 599 0 0 0 536 493 435 309 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1308.1 MA1308 1 WRKY70 Arabidopsis thaliana
WRKY GCM
MA1308.2 MA1308 2 WRKY70 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0429.1

ChIP-seq Centrality
-log(P-value): 21819.7

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0429.1

ChIP-seq Centrality
-log(P-value): 21739.5

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: