Detailed information of matrix profile MA1303.1

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Profile summary
Name: WRKY22
Matrix ID: MA1303.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: O04609  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 257 149 171 20 0 0 0 599 0 9 62 59 87 ]
C [ 67 128 314 0 0 0 0 0 599 58 14 50 78 ]
G [ 135 140 60 508 0 0 599 0 0 0 5 29 116 ]
T [ 140 182 54 71 599 599 0 0 0 532 518 461 318 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1303.1 MA1303 1 WRKY22 Arabidopsis thaliana
WRKY GCM
MA1303.2 MA1303 2 WRKY22 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0416.1

ChIP-seq Centrality
-log(P-value): 65415.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0416.1

ChIP-seq Centrality
-log(P-value): 65522.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: