Detailed information of matrix profile MA1303.1

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Profile summary
Name: WRKY22
Matrix ID: MA1303.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: O04609  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 318 461 518 532 0 0 0 599 599 71 54 182 140 ]
C [ 116 29 5 0 0 0 599 0 0 508 60 140 135 ]
G [ 78 50 14 58 599 0 0 0 0 0 314 128 67 ]
T [ 87 59 62 9 0 599 0 0 0 20 171 149 257 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1303.1 MA1303 1 WRKY22 Arabidopsis thaliana
WRKY GCM
MA1303.2 MA1303 2 WRKY22 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0416.1

ChIP-seq Centrality
-log(P-value): 65415.1

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0416.1

ChIP-seq Centrality
-log(P-value): 65522.9

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: