Detailed information of matrix profile MA1302.1

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Profile summary
Name: WRKY65
Matrix ID: MA1302.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9LP56  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 257 380 418 458 0 0 0 600 599 36 50 ]
C [ 122 43 25 6 0 1 600 0 0 542 38 ]
G [ 99 84 34 127 600 0 0 0 0 0 419 ]
T [ 122 93 123 9 0 599 0 0 1 22 93 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1302.1 MA1302 1 WRKY65 Arabidopsis thaliana
WRKY GCM
MA1302.2 MA1302 2 WRKY65 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0427.1

ChIP-seq Centrality
-log(P-value): 22711.5

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0427.1

ChIP-seq Centrality
-log(P-value): 22848.2

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: