Detailed information of matrix profile MA1299.2

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Profile summary
Name: WRKY17
Matrix ID: MA1299.2
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q9SJA8  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 94 117 125 0 0 0 125 127 20 29 ]
C [ 9 0 0 0 5 127 0 0 97 9 ]
G [ 18 6 1 127 1 0 2 0 8 78 ]
T [ 6 4 1 0 121 0 0 0 2 11 ]

Binding sites information

No Binding sites available for this model.

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1299.1 MA1299 1 WRKY17 Arabidopsis thaliana
WRKY GCM
MA1299.2 MA1299 2 WRKY17 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

Alias:

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Consensus:

Included Models:

GC Content: