Detailed information of matrix profile MA1295.1

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Profile summary
Name: WRKY20
Matrix ID: MA1295.1
Class: GCM
Family: WRKY
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 11449049
Uniprot ID: Q93WV0  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 235 162 34 11 2 0 0 599 1 0 231 160 156 ]
C [ 55 151 418 3 1 1 0 0 599 270 38 40 68 ]
G [ 157 156 74 420 0 0 600 1 0 0 108 136 127 ]
T [ 153 131 74 166 597 599 0 0 0 330 223 264 249 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1295.1 MA1295 1 WRKY20 Arabidopsis thaliana
WRKY GCM
MA1295.2 MA1295 2 WRKY20 Arabidopsis thaliana
WRKY GCM
     
There is no centrality information of the model.

TFFM details

TFFM ID: TFFM0414.1

ChIP-seq Centrality
-log(P-value): 4675.65

TFFM first order summary logos

TFFM details

TFFM ID: TFFM0414.1

ChIP-seq Centrality
-log(P-value): 4696.8

TFFM detailed summary logos

Description:

Alias:

Symbol:

Consensus:

Included Models:

GC Content: