Detailed information of matrix profile MA1288.2

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Profile summary
Name: TCP22
Matrix ID: MA1288.2
Class: TCP
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: Q9C7G4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 153 42 102 0 0 138 22 0 0 570 0 ]
C [ 70 87 9 0 0 58 513 595 594 0 581 ]
G [ 321 25 439 594 595 227 3 0 0 25 2 ]
T [ 51 441 45 1 0 172 57 0 1 0 12 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1288.1 MA1288 1 TCP22 Arabidopsis thaliana
TCP
MA1288.2 MA1288 2 TCP22 Arabidopsis thaliana
TCP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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