Detailed information of matrix profile MA1288.2

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Profile summary
Name: TCP22
Matrix ID: MA1288.2
Class: TCP
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: Q9C7G4  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 12 0 1 0 57 172 0 1 45 441 51 ]
C [ 2 25 0 0 3 227 595 594 439 25 321 ]
G [ 581 0 594 595 513 58 0 0 9 87 70 ]
T [ 0 570 0 0 22 138 0 0 102 42 153 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1288.1 MA1288 1 TCP22 Arabidopsis thaliana
TCP
MA1288.2 MA1288 2 TCP22 Arabidopsis thaliana
TCP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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