Detailed information of matrix profile MA1287.2

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Profile summary
Name: TCP21
Matrix ID: MA1287.2
Class: TCP
Family:
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 21241251
Uniprot ID: Q9FTA2  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 35 0 0 0 54 154 0 15 62 424 58 ]
C [ 5 20 0 0 1 289 597 582 415 37 338 ]
G [ 558 0 598 598 520 33 0 0 14 88 65 ]
T [ 0 578 0 0 23 122 1 1 107 49 137 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1287.1 MA1287 1 TCP21 Arabidopsis thaliana
TCP
MA1287.2 MA1287 2 TCP21 Arabidopsis thaliana
TCP
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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