Detailed information of matrix profile MA1279.2

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Profile summary
Name: DOF1.5
Matrix ID: MA1279.2
Class: Other
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: P68350  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 135 81 112 73 379 0 0 0 0 105 55 123 129 95 102 75 ]
C [ 54 38 41 273 140 600 9 1 0 1 71 199 147 143 114 121 ]
G [ 71 81 122 22 35 0 0 0 1 8 34 94 73 61 55 75 ]
T [ 340 400 325 232 46 0 591 599 599 486 440 184 251 301 329 329 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1279.1 MA1279 1 DOF1.5 Arabidopsis thaliana
DOF Other
MA1279.2 MA1279 2 DOF1.5 Arabidopsis thaliana
DOF Other
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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