Detailed information of matrix profile MA1279.2

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Profile summary
Name: DOF1.5
Matrix ID: MA1279.2
Class: Other
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: P68350  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 329 329 301 251 184 440 486 599 599 591 0 46 232 325 400 340 ]
C [ 75 55 61 73 94 34 8 1 0 0 0 35 22 122 81 71 ]
G [ 121 114 143 147 199 71 1 0 1 9 600 140 273 41 38 54 ]
T [ 75 102 95 129 123 55 105 0 0 0 0 379 73 112 81 135 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1279.1 MA1279 1 DOF1.5 Arabidopsis thaliana
DOF Other
MA1279.2 MA1279 2 DOF1.5 Arabidopsis thaliana
DOF Other
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

Description:

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