Detailed information of matrix profile MA1267.2

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Profile summary
Name: DOF5.8
Matrix ID: MA1267.2
Class: Other
Family: DOF
Collection: CORE
Taxon: Plants
Species: Arabidopsis thaliana
Data Type: DAP-seq
Validation: 10758479
Uniprot ID: Q9FGD6  
Source: 27203113
Comment:

Sequence logo

Frequency matrix

         
A [ 91 105 84 102 146 134 107 64 89 72 20 113 290 1 1 0 0 105 57 ]
C [ 132 142 104 114 119 149 184 139 39 44 116 105 79 585 21 0 1 22 78 ]
G [ 49 42 41 33 37 62 32 26 32 35 25 27 107 10 1 0 0 1 86 ]
T [ 325 308 368 348 295 252 274 368 437 446 436 352 121 1 574 597 596 469 376 ]

Binding sites information

   

External links

Matrix ID Base ID Version Name Species Family Class Sequence logo
MA1267.1 MA1267 1 DOF5.8 Arabidopsis thaliana
DOF Other
MA1267.2 MA1267 2 DOF5.8 Arabidopsis thaliana
DOF Other
     
There is no centrality information of the model.
TFFM first order profile doesn't exist for this profile.
TFFM detailed profile doesn't exist for this profile.

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